Fathers and Daughters
46min 9 sec
1hr 18 min 4 sec
1 hr 18 min 55 sec
That was all that I saw but I'm pretty sure there are more.
In the scene where Jerry and George go thru airport security.. It's on a poster when they after they pass through the check point.
Around 1 hour, there are WTC ruins
The 5th Estate
Shot at 2 min 17 sec
and at 55 min 30 sec with a few shots over the next 20 seconds.
There's a cartoony poster for a movie from 1986 called America with Robert Downey Jr. There is a shot of the WTCs in the mid left of the poster.
Around 15 min and 18 minutes.
The two main characters are sitting in a restaurant and there is a neon skyline design on the wall behind them with the WTCs in the skyline (I believe anyway).
The Ladies Man movie poster has the WTCs in it.